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CreatorTitleDescriptionSubjectDate
251 Freire, JulianaSiphoning hidden-web data through keyword-based interfacesIn this paper, we study the problem of automating the retrieval of data hidden behind simple search interfaces that accept keyword-based queries. Our goal is to automatically retrieve all available results (or, as many as possible). We propose a new approach to siphon hidden data that automatically ...2004-01-01
252 Stringfellow, Gerald B.Simulation of self-assembled compositional core-shell structures in In xGa 1-xN nanowiresWe report the simulation of compositional core-shell structure formation in epitaxial InGaN nanowires (NWs) and its dependence on kinetic growth mode and epitaxial relation to substrate, based on atomistic-strain-model Monte Carlo simulations. On a lattice mismatched substrate, the layer-by-layer gr...2012-01-01
253 Regehr, JohnUsing hierarchical scheduling to support soft real-time applications in general-purpose operating systemsThe CPU schedulers in general-purpose operating systems are designed to provide fast response time for interactive applications and high throughput for batch applications. The heuristics used to achieve these goals do not lend themselves to scheduling real-time applications, nor do they meet other s...2001-01-01
254 Kirby, Robert MichaelVerifying volume rendering using discretization error analysisWe propose an approach for verification of volume rendering correctness based on an analysis of the volume rendering integral, the basis of most DVR algorithms. With respect to the most common discretization of this continuous model (Riemann summation), we make assumptions about the impact of parame...2014-01-01
255 Ring, Terry ArthurVerification of analytic energy moments for the one-dimensional energy dependent neutron diffusion equation with MCNP5 and Attila-7.1.0The energy dependent neutron diffusion equation (EDNDE) is converted into a moment equation which is solved analytically for the 1-D problem of a bare sphere of pure 235U. The normalized moments 0-5 generated analytically are compared to normalized energy moments, from Monte Carlo N Particle 5 versi...2012-01-01
256 Ring, Terry ArthurValidation of energy moments from the one-dimensional energy dependent neutron diffusion equation, MCNP5 and Attila-7.1.0 with the GODIVA experimentNormalized neutron energy moments (moments) from the one-dimensional energy dependent neutron diffusion equation (EDNDE), Monte Carlo N Particle 5 version 1.40 (MCNP5) and Attila-7.1.0-beta version (Attila) are validated with the GODIVA experiment (GODIVA). Energy moments 0-5 for all three methods a...2012-01-01
257 Myers, Chris J.Utilizing stochastic model checking to analyze genetic circuitsWhen designing and analyzing genetic circuits, researchers are often interested in the probability of the system reaching a given state within a certain amount of time. Usually, this involves simulating the system to produce some time series data and analyzing this data to discern the state probabil...2012-01-01
258 Mitchell, Joyce A.Using information prescriptions to refer patients with metabolic conditions to the Genetics Home Reference websiteObjectives: The objectives of this study were to assess the reactions of adult patients and parents of children with metabolic conditions to receipt of an ‘‘information prescription'' (IP) to visit Genetics Home Reference (GHR), a National Institutes of Health/National Library of Medicine online...2011-01-01
259 Regehr, JohnVertically integrated analysis and transformation for embedded softwareProgram analyses and transformations that are more aggressive and more domain-specific than those traditionally performed by compilers are one possible route to achieving the rapid creation of reliable and efficient embedded software. We are creating a new framework for Vertically Integrated Program...2003-01-01
260 Minteer, Shelley D.Utilizing DNA for electrocatalysis: DNA-Nickel aggregates as anodic electrocatalysts for methanol, ethanol, glycerol, and glucoseDNA-nickel aggregates were electrodeposited onto glassy carbon electrode surfaces and have shown electrocatalytic activity for oxidation of methanol, ethanol, glycerol, and glucose at room temperature in alkaline solutions. Bulk electrolysis oxidation products identified by 13C NMR include carbonate...2013-01-01
261 Capecchi, Mario R.Modeling alveolar soft part sarcomagenesis in the mouse: a role for lactate in the tumor microenvironmentAlveolar soft part sarcoma (ASPS), a deadly soft tissue malignancy with a predilection for adolescents and young adults, associates consistently with t(X;17) translocations that generate the fusion gene ASPSCR1-TFE3. We proved the oncogenic capacity of this fusion gene by driving sarcomagenesis in m...2014-01-01
262 Olivera, Baldomero M.Modulation of conotoxin structure and function is achieved through a multienzyme complex in the venom glands of cone snailsBackground: Conotoxins can be utilized to investigate enzyme-assisted folding of disulfide-rich peptides. Results: Various ER-resident cone snail enzymes act in concert to accelerate the oxidative folding of conotoxins and modulate their conformation by reconfiguring disulfide connectivities. Conclu...2012-01-01
263 Pascucci, ValerioThe natural Helmholtz-Hodge decomposition for open-boundary flow analysisThe Helmholtz-Hodge decomposition (HHD), which describes a flow as the sum of an incompressible, an irrotational, and a harmonic flow, is a fundamental tool for simulation and analysis. Unfortunately, for bounded domains, the HHD is not uniquely defined, traditionally, boundary conditions are impose...2014-01-01
264 Voth, Gregory AlanNanostructural organization in acetonitrile/ionic liquid mixtures: molecular dynamics simulations and optical Kerr effect spectroscopyIn this paper, the nanostructural organization and subpicosecond intermolecular dynamics in mixtures of acetonitrile and the ionic liquid (IL) 1-pentyl-3-methylimidazolium bis{(trifluoromethane)sulfonyl}amide ([C5mim][NTf2]) were studied as a function of concentration using molecular dynamics (MD) s...2012-01-01
265 Pascucci, ValerioMultivariate volume visualization through dynamic projectionsWe propose a multivariate volume visualization framework that tightly couples dynamic projections with a high-dimensional transfer function design for interactive volume visualization. We assume that the complex, high-dimensional data in the attribute space can be well-represented through a collecti...2014-01-01
266 Parkinson, John StansfieldMutational analysis of the P1 phosphorylation domain in E. coli CheA, the signaling kinase for chemotaxisThe histidine autokinase CheA functions as the central processing unit in the Escherichia coli chemotaxis signaling machinery. CheA receives autophosphorylation control inputs from chemoreceptors and in turn regulates the flux of signaling phosphates to the CheY and CheB response regulator proteins...2014-01-01
267 Gerig, GuidoMultivariate longitudinal statistics for neonatal-pediatric brain tissue developmentThe topic of studying the growth of human brain development has become of increasing interest in the neuroimaging community. Cross-sectional studies may allow comparisons between means of different age groups, but they do not provide a growth model that integrates the continuum of time, nor do they ...2008-01-01
268 Jorgensen, ErikNano-fEM: Protein localization using photo-activated localization microscopy and electron microscopyMapping the distribution of proteins is essential for understanding the function of proteins in a cell. Fluorescence microscopy is extensively used for protein localization, but subcellular context is often absent in fluorescence images. Immuno-electron microscopy, on the other hand, can localize pr...2012-01-01
269 Gerig, GuidoMultivariate Modeling of longitudinal MRI in early brain development with confidence measuresThe human brain undergoes rapid organization and structuring early in life. Longitudinal imaging enables the study of these changes over a developmental period within individuals through estimation of population growth trajectory and its variability. In this paper, we focus on maturation of white an...2013-01-01
270 Ostafin, AgnesNanomedicine making headway across the blood brain barrierNanotechnological advances implemented by nanomedicine have allowed significant development of imaging strategies, therapeutics and theranostics for many severe and life threatening diseases such as brain tumors, Alzheimer's disease, Parkinson's disease and other neurological disorders. The Blood-Br...2012-01-01
271 Gopalakrishnan, GaneshOvis: A framework for visual analysis of ocean forecast ensemblesWe present a novel integrated visualization system that enables interactive visual analysis of ensemble simulations of the sea surface height that is used in ocean forecasting. The position of eddies can be derived directly from the sea surface height and our visualization approach enables their int...2014-01-01
272 Sudan, KshitijOptimizing datacenter power with memory system levers for guaranteed quality-of-serviceCo-location of applications is a proven technique to improve hardware utilization. Recent advances in virtualization have made co-location of independent applications on shared hardware a common scenario in datacenters. Colocation, while maintaining Quality-of-Service (QoS) for each application is a...2012-01-01
273 Berzins, MartinParallel breadth first search on GPU clustersFast, scalable, low-cost, and low-power execution of parallel graph algorithms is important for a wide variety of commercial and public sector applications. Breadth First Search (BFS) imposes an extreme burden on memory bandwidth and network communications and has been proposed as a benchmark that m...2014-01-01
274 Farrell, Timothy W.Organizational culture associated with provider satisfactionBackground: Organizational culture is key to the successful implementation of major improvement strategies. Transformation to a patient-centered medical home (PCHM) is such an improvement strategy, requiring a shift from provider-centric care to team-based care. Because this shift may impact provide...2014-01-01
275 Gopalakrishnan, GaneshOvercoming extreme-scale reproducibility challenges through a unified, targeted, and multilevel toolsetReproducibility, the ability to repeat program executions with the same numerical result or code behavior, is crucial for computational science and engineering applications. However, non-determinism in concurrency scheduling often hampers achieving this ability on high performance computing (HPC) sy...2013-01-01
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