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26 Gerig, GuidoBrain maturation of newborns and infantsRecently, imaging studies of early human development have received more attention, as improved modeling methods might lead to a clearer understanding of the origin, timing, and nature of differences in neurodevelopmental disorders. Non-invasivemagnetic resonance imaging (MRI) can provide three-dimen...2011-01-01
27 Le Ber, Jeanne M.; Mower, AllysonIAIMS Newsletter Spring 2006The IAIMS Newsletter provides valuable information about Library activities and resources as well as informative articles related to information technology.Newsletter; IAIMS2006-04-01
28 Ehleringer, James R.Bayesian integration of isotope ratio for geographic sourcing of castor beansRecent years have seen an increase in the forensic interest associated with the poison ricin, which is extracted from the seeds of the Ricinus communis plant. Both light element (C, N, O, and H) and strontium (Sr) isotope ratios have previously been used to associate organic material with geographic...2012-01-01
29 Tasdizen, TolgaThree-dimensional alignment and merging of confocal microscopy stacksWe describe an efficient, robust, automated method for image alignment and merging of translated, rotated and flipped confocal microscopy stacks. The samples are captured in both directions (top and bottom) to increase the SNR of the individual slices. We identify the overlapping region of the two s...2013-01-01
30 Mastrangelo, Carlos H.Detection of biomolecular binding by fourier-transform SPRSurface plasmon resonance (SPR) is a widely used label-free detection technique that has many applications in drug discovery, pharmacokinetics, systems biology and food science. The SPR technique measures the dynamics of a biomolecular interaction at a surface, yielding kinetic association and diss...2010
31 Dwight, Zachary LawrenceHeterozygote PCR product melting curve predictionMelting curve prediction of PCR products is limited to perfectly complementary strands. Multiple domains are calculated by recursive nearest-neighbor thermodynamics. However, the melting curve of an amplicon containing a heterozygous single nucleotide variant (SNV) after PCR is the composite of four...2014-01-01
32 Bohs, Lynn A.Eggplant origins: out of Africa, into the OrientThe eggplant (Solanum melongena L.), also known as aubergine or brinjal, has been cultivated for centuries in the Old World and is currently a crop species of global importance. Despite this, hypotheses of eggplant evolution have been fraught with controversy. Previous conclusions have relied solely...Eggplant origins; Crop domestication; Solanum melongena complex; Solanum incanum; DNA sequence; Africa; Asia2010
33 Bohs, Lynn A.Phylogeny of Balsamorhiza and Wyethia (Asteraceae: Heliantheae) using ITS, ETS, and trnK sequence dataBalsamorhiza and Wyethia together comprise 24 species native to western North America. All species in the two genera are perennial herbs with large taproots and chromosome base numbers of x = 19. The species of Balsamorhiza have exclusively basal leaves while the species of Wyethia have cauline leav...Balsamorhiza; Wyethia; Asteraceae; Engelmanniinae; nuclear ribosomal DNA2007
34 Coley, Phyllis D.Coibanoles, a new class of meroterpeniods produced by pycnoporus sanguineusThree new terpenoids of mixed biosynthetic origin were isolated from the culture filtrate of the endophytic fungus Pycnoporus sanguineus. Their structures were determined by extensive spectroscopic analyses. We have named these tricyclic and tetracyclic metabolites ?coibanoles A?C? in reference to...2012
35 Gerig, GuidoStatistics of populations of images and its embedded objects: driving applications in neuroimagingWork in progress towards modeling shape statistics of multi-object complexes is presented. Constraints defined by the set of objects such as a compact representation of object shape relationships and correlation of shape changes might have advantages for automatic segmentation and group discriminati...2006-01-01
36 Kerber, Richard A.Mitochondrial genomic analysis of late onset alzheimers disease reveals protective haplogroups H6A1A/H6A1B: the Cache County study on memory in agingBackground: Alzheimer's disease (AD) is the most common cause of dementia and AD risk clusters within families. Part of the familial aggregation of AD is accounted for by excess maternal vs. paternal inheritance, a pattern consistent with mitochondrial inheritance. The role of specific mitochondrial...2012-01-01
37 Capecchi, Mario R.Modeling alveolar soft part sarcomagenesis in the mouse: a role for lactate in the tumor microenvironmentAlveolar soft part sarcoma (ASPS), a deadly soft tissue malignancy with a predilection for adolescents and young adults, associates consistently with t(X;17) translocations that generate the fusion gene ASPSCR1-TFE3. We proved the oncogenic capacity of this fusion gene by driving sarcomagenesis in m...2014-01-01
38 Gesteland, Raymond F.; Baranov, Pavel V.; Atkins, John F.Expression levels influence ribosomal frameshifting at the tandem rare arginine codons AGG_AGG and AGA_AGA in Escherichia coliABSTRACT: The rare codons AGG and AGA comprise 2% and 4%, respectively, of the arginine codons of Escherichia coli K-12, and their cognate tRNAs are sparse. At tandem occurrences of either rare codon, the paucity of cognate aminoacyl tRNAs for the second codon of the pair facilitates peptidyl-tRNA...Gene expression; Frameshifting; E. coli; Arginine codons2005
39 Bohs, Lynn A.Phylogenetic relationships in solanum section Androceras (Solanaceae)The Leptostemonum clade of Solanum contains approximately 350-450 species, including the cultivated eggplant, S. melongena. This clade is characterized by the presence of prickles and apically attenuate anthers. Solanum section Androceras, the focus of this study, is a group of ca. 12 species belon...2010-12-01
40 Poulter, Charles DaleCatalytic mechanism of Escherichia coli isopentenyl diphosphate isomerase involves Cys-67, Glu-116, and Tyr-104 as suggested by crystal structures of complexes with transition state analogues and irreversible inhibitorsIsopentenyl diphosphate (IPP):dimethylallyl diphosphate (DMAPP) isomerase is a key enzyme in the biosynthesis of isoprenoids. The reaction involves protonation and deprotonation of the isoprenoid unit and proceeds through a carbocationic transition state. Analysis of the crystal structures (2 A) of ...Catalytic Domain; Crystallography; Organophosphorus Compounds2003-04-04
41 Spencer S. Eccles Health Sciences Library, University of UtahIAIMS Newsletter Summer 2003The IAIMS Newsletter provides valuable information about Library activities and resources as well as informative articles related to information technology.IAIMS2003-05-14
42 Myers, Chris J.Learning genetic regulatory network connectivity from time series dataAbstract. Recent experimental advances facilitate the collection of time series data that indicate which genes in a cell are expressed. This paper proposes an efficient method to generate the genetic regulatory network inferred from time series data. Our method fi_x000C_rst encodes the data into le...2006
43 Freire, Juliana; Silva, Claudio T.Provenance for computational tasks: a surveyThe problem of systematically capturing and managing provenance for computational tasks has recently received significant attention because of its relevance to a wide range of domains and applications. The authors give an overview of important concepts related to provenance management, so that poten...Provenance management; Computational tasks2008-05
44 Erickson, J. AlanThe use of a modular titanium baseplate with a press-fit keel implanted with a surface cementing technique for primary total knee arthroplastyLittle data exists regarding outcomes following TKA performed with surface-cementation for the fixation of modular tibial baseplates with press-fit keels.Thus, we retrospectively reviewed the clinical and radiographic outcomes of 439 consecutive primary TKAs performed with surface cemented tibial co...2014-01-01
45 Shapiro, Michael D.Divergence, convergence, and the ancestry of feral populations in the domestic rock pigeonStringham, Sydney A.; Mulroy, Elisabeth E.; Xing, Jinchuan; Record, David; Guernsey, Michael W.; Aldenhoven, Jaclyn T.; Osborne, Edward J.
46 University Research Cyberinfrastructure CommitteeUniversity research cyberinfrastructure committee interim report"Campus cyberinfrastructure is not just about technology." Beyond access to technology, Cyberinfrastructure (CI) defines a new information technology paradigm that includes people and their expertise, enabling technologies, software and tools, and provides a foundation for an integrated approach to...Cyberinfrastructure; Computing; Information Technology; Strategic Plan2006-08-31
47 Bohs, Lynn A.Phylogeny of the Cyphomandra clade of the genus Solanum (Solanaceae) based on ITS sequence data13 major clades can be recognized within the genus Solatium (Solanaceae) based on chloroplast DNA sequence data. One of these is the Cyphomandra clade, which includes about 50 neotropical species. These have traditionally been placed into two or three sections: S. section Pachyphylla (formerly recog...Cyphomandra; ITS; osmophores; self-incompatibility; Solanum2007
48 Olivera, Baldomero M.Combined proteomic and transcriptomic interrogation of the venom gland of conus geographus uncovers novel components and functional compartmentalizationCone snails are highly successful marine predators that use complex venoms to capture prey. At any given time, hundreds of toxins (conotoxins) are synthesized in the secretory epithelial cells of the venom gland, a long and convoluted organ that can measure 4 times the length of the snail's body. In...2014-01-01
49 Spencer S. Eccles Health Sciences Library, University of UtahIAIMS Newsletter Fall 2003The IAIMS Newsletter provides valuable information about Library activities and resources as well as informative articles related to information technology.IAIMS2003-08-21
50 Spencer S. Eccles Health Sciences Library, University of UtahIAIMS Newsletter Summer 2002The IAIMS Newsletter is published three times a year (August, January, May) with one InfoFair supplement and provides valuable information about Library activities and resources as well as informative articles related to information technology.IAIMS2002-05-28
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