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1 Gerig, Guido3D tensor normalization for improved accuracy in DTI tensor registration methodsThis paper presents a method for normalization of diffusion tensor images (DTI) to a xed DTI template, a pre-processing step to improve the performance of full tensor based registration methods. The proposed method maps the individual tensors of the subject image in to the template space based on ma...2012-01-01
2 Myers, Chris J.A compositional minimization approach for large asynchronous design verificationThis paper presents a compositional minimization approach with efficient state space reductions for verifying non-trivial asynchronous designs. These reductions can result in a reduced model that contains the exact same set of observably equivalent behavior in the original model, therefore no false ...2012-01-01
3 Adler, Frederick R.A time since recovery model with varying rates of loss of immunityFor many infectious diseases, immunity wanes over time. The majority of SIRS models assume that this loss of immunity takes place at a constant rate. We study temporary immunity within a SIRS model structure if the rate of loss of immunity can depend on the time since recovery from disease.We determ...2012-01-01
4 Hawkes, KristenAge-related decline in ovarian follicle stocks differ between chimpanzee (Pan troglodytes) and humansSimilarity in oldest parturitions in humans and great apes suggests that we maintain ancestral rates of ovarian aging. Consistent with that hypothesis, previous counts of primordial follicles in postmortem ovarian sections from chimpanzees (Pan troglodytes) showed follicle stock decline at the same ...2015-01-01
5 Adler, Frederick R.Alternating host cell tropism shapes the persistence, evolution and coexistence of Epstein-Barr virus infections in humanEpstein-Barr virus (EBV) infects and can persist in a majority of people worldwide. Within an infected host, EBV targets two major cell types, B cells and epithelial cells, and viruses emerging from one cell type preferentially infect the other. We use mathematical models to understand why EBV infec...2011
6 Adler, Frederick R.Alternating host cell tropism shapes the persistence, evolution and coexistence of Epstein-Barr virus infections in humanEpstein-Barr virus (EBV) infects and can persist in a majority of people worldwide. Within an infected host, EBV targets two major cell types, B cells and epithelial cells, and viruses emerging from one cell type preferentially infect the other. We use mathematical models to understand why EBV infec...2010
7 Gerig, GuidoAnalysis of longitudinal shape variability via subject specific growth modelingStatistical analysis of longitudinal imaging data is crucial for understanding normal anatomical development as well as disease progression. This fundamental task is challenging due to the difficulty in modeling longitudinal changes, such as growth, and comparing changes across different populations...2012-01-01
8 Jayamohan, HarikrishnanApplications of microfluidics for molecular diagnosticsDiagnostic assays implemented in microfluidic devices have developed rapidly over the past decade and are expected to become commonplace in the next few years. Hundreds of microfluidics-based approaches towards clinical diagnostics and pathogen detection have been reported with a general theme of ra...Microfluidics; Micro-total-analysis-systems; Lab-on-a-chip; Point-of-care devices; Sample preparation; MEMS; Rapid prototyping; Biomarker detection; Personalized medicine; Global health care2012-11-04
9 Garrett, Timothy J.Are there basic physical constraints on future anthropogenic emissions of carbon dioxide?Global Circulation Models (GCMs) provide projections for future climate warming using a wide variety of highly sophisticated anthropogenic CO2 emissions scenarios as input, each based on the evolution of four emissions "drivers": population p, standard of living g, energy productivity (or efficiency...Global circulation models; Anthropogenic carbon dioxide emissions2009
10 Gerig, GuidoAssessment of reliability of multi-site neuroimaging via traveling phantom studyThis paper describes a framework for quantitative analysis of neuroimaging data of traveling human phantoms used for cross-site validation. We focus on the analysis of magnetic resonance image data including intra- and intersite comparison. Locations and magnitude of geometric deformation is studied...2008-01-01
11 Freire, JulianaBeyond depth-first: improving tabled logic programs through alternative scheduling strategiesTabled evaluations ensure termination of logic programs with fi nite models by keeping track of which subgoals have been called Given several variant subgoals in an evaluation, only the fi rst one encountered will use program clause resolution the rest uses answer resolution This use of answer r...Alternate scheduling; SLG-WAM; Tabled logic programs1996
12 Gerig, GuidoBrain lesion segmentation through physical model estimationSegmentations of brain lesions from Magnetic Resonance (MR) images is crucial for quantitative analysis of lesion populations in neuroimaging of neurological disorders. We propose a new method for segmenting lesions in brain MRI by inferring the underlying physical models for pathology. We use the r...Magnetic resonance (MR) images; Neurological disorders; Diffusion tensor imaging (DTI).2008-01-01
13 Reichler, Thomas J.Breaking down the tropospheric circulation response by forcingThis study describes simulated changes in the general circulation during the twentieth and twenty -first centuries due to a number of individual direct radiat ive forcings and warming sea surface temperatures, by examining very long time-slice simulations created with an enhanced version of the Geop...2012-01-01
14 Digre, Kathleen B.; Blumenthal, Deborah T.; Cessna, Melissa H.; Gopez, Evelyn V.; Shen, YueCarcinomatous meningitis as the presenting manifestation of gallbladder carcinoma: case report and review of the literatureThe primary tumors that typically cause carcinomatous meningitis include lung cancer, breast cancer, leukemia, lymphoma and melanoma. A variety of neurological signs and symptoms can be seen depending on the extent and location of the meningeal metastasis. Once the diagnosis of carcinomatous meningi...Carcinomatous Meningitis; Gallbladder Carcinoma; Leptomeningeal Metastasis; Meningeal Carcinomatosis; Cranial Neuropathy2004-10
15 Schmidt, Meic H.Cervical spine metastases: techniques for anterior reconstruction and stabilizationThe surgical management of cervical spine metastases continues to evolve and improve. The authors provide an overview of the various techniques for anterior reconstruction and stabilization of the subaxial cervical spine after corpectomy for spinal metastases. Vertebral body reconstruction can be ac...2012-01-01
16 Johnson, Christopher R.; Parker, Steven G.; Whitaker, Ross T.; Hansen, Charles D.Computational field visualizationToday, scientists, engineers, and medical researchers routinely use computers to simulate complex physical phenomena. Such simulations present new challenges for computational scientists, including the need to effectively analyze and visualize complex three-dimensional data. As simulations become mo...Volume rendering; Isosurface extraction; Ray tracing; Multi-field visualizations2001
17 Gardner, Reed M.Computerized Management of Intensive Care PatientsBiomedical Informatics1986
18 Codding, BrianConservation or co-evolution? Intermediate levels of aboriginal burning and hunting have positive effects on kangaroo populations in Western AustraliaStudies of conservation in small scale societies typically portray indigenous peoples as either sustainably managing resources, or forsaking long-term sustainability for short-term gains. To explain this variability, we propose an alternative framework derived from a co-evolutionary perspective. In ...2014-01-01
19 Gerig, GuidoConstrained data decomposition and regression for analyzing healthy aging from fiber tract diffusion propertiesIt has been shown that brain structures in normal aging undergo significant changes attributed to neurodevelopmental and neurodegeneration processes as a lifelong, dynamic process. Modeling changes in healthy aging will be necessary to explain differences to neurodegenerative patterns observed in m...2009-01-01
20 Battin, Margaret P.Continuous sedation until death: moral justifications of physicians and nurses─a content analysis of opinion piecesContinuous Sedation until Death (CSD), the act of reducing or removing the consciousness of an incurably ill patient until death, often provokes medical-ethical discussions in the opinion sections of medical and nursing journals. A content analysis of opinion pieces in medical and nursing literature...2012-01-01
21 Wen, MingCorrelates of leisure-time physical activity participation among Latino children and adolescents with acanthosis nigricansChildhood obesity has become a serious public health concern in the United States. The prevalence rates of childhood obesity largely increased in the 1980s and 1990s and remained persistently high between 1999-2000 and 2007-2008 in the United States [20]. The highest extreme obesity prevalence rate,...2014-01-01
22 Simpson, Jamesina J.Current and future applications of 3-D global earth-ionosphere waveguide models based on the full-vector maxwells equations FDTD methodAdvances in computing technologies in recent decades have provided a means of generating and performing highly sophisticated computational simulations of electromagnetic phenomena. In particular, just after the turn of the 21st century, improvements to computing infrastructures provided for the firs...2009-01-01
23 Berzins, MartinDAG-based software frameworks for PDEsThe task-based approach to software and parallelism is well-known and has been proposed as a potential candidate, named the silver model, for exas-cale software. This approach is not yet widely used in the large-scale multi-core parallel computing of complex systems of partial differential equations...2012-01-01
24 Adler, Frederick R.Deconvolution of isotope signals from bundles of multiple hairsSegmental analysis of hair has been used in diverse fields ranging from forensics to ecology to measure the concentration of substances such as drugs and isotopes. Multiple hairs are typically combined into a bundle for segmental analysis to obtain a high-resolution series of measurements. Individua...2014-01-01
25 Couldwell, William T.; Jensen, Randy L.; Jensen, Elizabeth M.Development of contrast enhancement after long-term observation of a dysembryoplastic neuroepithelial tumorDysembryoplastic neuroepithelial tumors (DNET) are usually benign lesions that arise in cortical regions and are discovered after new onset of seizure. These lesions have many different imaging characteristics. We report a patient with a presumed low-grade medial temporal lobe lesion that was follow...Brain tumor; Dysembryoplastic neuroepithelial tumors; DNET; Imaging; Seizures2006
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