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CreatorTitleDescriptionSubjectDate
51 Meyer, Miriah DawnDesign activity framework for visualization designAn important aspect in visualization design is the connection between what a designer does and the decisions the designer makes. Existing design process models, however, do not explicitly link back to models for visualization design decisions. We bridge this gap by introducing the design activity fr...2014-01-01
52 Gerig, GuidoDiffusion tensor imaging: application to the study of the developing brainObjective: To provide an overview of diffusion tensor imaging (DTI) and its application to the study of white matter in the developing brain, in both healthy and clinical samples. Method: The development of DTI and its application to brain imaging of white matter tracts is discussed. 48 studies usi...2007-01-01
53 Anderson, Erik WesleyDiscovering and visualizing patterns in EEG dataBrain activity data is often collected through the use of electroen-cephalography (EEG). In this data acquisition modality, the electric fields generated by neurons are measured at the scalp. Although this technology is capable of measuring activity from a group of neurons, recent efforts provide ev...2013-01-01
54 Gerig, GuidoDiscrimination analysis using Multi-object statistics of shape and poseA main focus of statistical shape analysis is the description of variability of a population of geometric objects. In this paper, we present work towards modeling the shape and pose variability of sets of multiple objects. Principal geodesic analysis (PGA) is the extension of the standard technique ...2007-01-01
55 Gerig, GuidoDiscordance of prenatal and neonatal brain development in twinsBackground: Discordance of birth weight has been observed in twin pairs, though little is known about prenatal and early neonatal discordance of head and brain size, and the role that zygosity and chorionicity play in discordances of early brain development in twins. Aims: To compare prenatal and ne...2009-01-01
56 Gerig, GuidoDTIPrep: quality control of diffusion-weighted imagesIn the last decade, diffusion MRI (dMRI) studies of the human and animal brain have been used to investigate a multitude of pathologies and drug-related effects in neuroscience research. Study after study identifies white matter (WM) degeneration as a crucial biomaker for all these diseases. The too...2014-01-01
57 Gerig, GuidoGeodesic shape regression in the framework of currentsShape regression is emerging as an important tool for the statistical analysis of time dependent shapes. In this paper, we develop a new generative model which describes shape change over time, by extending simple linear regression to the space of shapes represented as currents in the large deformat...2013-01-01
58 Gerig, GuidoGeodesic image regression with a sparse parameterization of diffeomorphismsImage regression allows for time-discrete imaging data to be modeled continuously, and is a crucial tool for conducting statistical analysis on longitudinal images. Geodesic models are particularly well suited for statistical analysis, as image evolution is fully characterized by a baseline image an...2013-01-01
59 Gerig, GuidoGeodesic regression of image and shape data for improved modeling of 4D trajectoriesA variety of regression schemes have been proposed on images or shapes, although available methods do not handle them jointly. In this paper, we present a framework for joint image and shape regression which incorporates images as well as anatomical shape information in a consistent manner. Evolutio...2014-01-01
60 Sanderson, Allen ReedAn alternative formulation of lyapunov exponents for computing lagrangian coherent structuresLagrangian coherent structures are time-evolving surfaces that highlight areas in flow fields where neighboring advected particles diverge or converge. The detection and understanding of such structures is an important part of many applications such as in oceanography where there is a need to predic...2014-01-01
61 Gerig, GuidoConstrained data decomposition and regression for analyzing healthy aging from fiber tract diffusion propertiesIt has been shown that brain structures in normal aging undergo significant changes attributed to neurodevelopmental and neurodegeneration processes as a lifelong, dynamic process. Modeling changes in healthy aging will be necessary to explain differences to neurodegenerative patterns observed in m...2009-01-01
62 Rosen, Paul Andrew2D vector field simplification based on robustnessVector field simplification aims to reduce the complexity of the flow by removing features in order of their relevance and importance, to reveal prominent behavior and obtain a compact representation for interpretation. Most existing simplification techniques based on the topological skeleton succes...2014-01-01
63 Gerig, Guido3D of brain shape and volume after cranial vault remodeling surgery for craniosynostosis correction in infantsThe skull of young children is made up of bony plates that enable growth. Craniosynostosis is a birth defect that causes one or more sutures on an infant's skull to close prematurely. Corrective surgery focuses on cranial and orbital rim shaping to return the skull to a more normal shape. Functional...2013-01-01
64 Gerig, Guido4D active cut: an interactive tool for pathological anatomy modeling4D pathological anatomy modeling is key to understanding complex pathological brain images. It is a challenging problem due to the difficulties in detecting multiple appearing and disappearing lesions across time points and estimating dynamic changes and deformations between them. We propose a novel...2014-01-01
65 Gerig, Guido3D tensor normalization for improved accuracy in DTI tensor registration methodsThis paper presents a method for normalization of diffusion tensor images (DTI) to a xed DTI template, a pre-processing step to improve the performance of full tensor based registration methods. The proposed method maps the individual tensors of the subject image in to the template space based on ma...2012-01-01
66 Gerig, Guido4D modeling of infant brain growth in Down's Syndrome and controls from longitudinal MRIModeling of early brain growth trajectories from longitudinal MRI will provide new insight into neurodevelopmental characteristics, timing and type of changes in neurological disorders from controls. In addition to an ongoing large-scale infant autism neuroimaging study 1, we recruited 4 infants wit...2014-01-01
67 Gerig, GuidoComputational anatomy to assess longitudinal trajectory of brain growthThis paper addresses the challenging problem of statistics on images by describing average and variability. We describe computational anatomy tools for building 3-D and spatio-temporal 4-D atlases of volumetric image data. The method is based on the previously published concept of unbiased atlas bui...2006-01-01
68 Gerig, GuidoCortical enhanced tissue segmentation of neonatal brain MR images acquired by a dedicated phased array coilThe acquisition of high quality MR images of neonatal brains is largely hampered by their characteristically small head size and low tissue contrast. As a result, subsequent image processing and analysis, especially for brain tissue segmentation, are often hindered. To overcome this problem, a dedic...2009-01-01
69 Gerig, GuidoTeasing apart the heterogeneity of autism: Same behavior, different brains in toddlers with fragile X syndrome and autismTo examine brain volumes in substructures associated with the behavioral features of children with FXS compared to children with idiopathic autism and controls. A cross-sectional study of brain substructures was conducted at the first time-point as part of an ongoing longitudinal MRI study of brain ...2009-01-01
70 Gerig, GuidoTemporal and spatial development of axonal maturation and myelination of white matter in the developing brainBACKGROUND AND PURPOSE-Diffusion tensor imaging (DTI) has been widely used to investigate the development of white matter (WM). However, information about this development in healthy children younger than 2 years of age is lacking, and most previous studies have only measured fractional anisotropy (...2009-01-01
71 Gerig, GuidoMulti-atlas segmentation of subcortical brain structures via the AutoSeg software pipelineAutomated segmenting and labeling of individual brain anatomical regions, in MRI are challenging, due to the issue of individual structural variability. Although atlas-based segmentation has show its potential for both tissue and structure segmentation, due to the inherent natural variability as wel...2014-01-01
72 Gerig, GuidoMulti-object analysis of volume, pose, and shape using statistical discriminationOne goal of statistical shape analysis is the discrimination between two populations of objects. Whereas traditional shape analysis was mostly concerned with single objects, analysis of multi-object complexes presents new challenges related to alignment and pose. In this paper, we present a methodol...2010-01-01
73 Gerig, GuidoAssessment of reliability of multi-site neuroimaging via traveling phantom studyThis paper describes a framework for quantitative analysis of neuroimaging data of traveling human phantoms used for cross-site validation. We focus on the analysis of magnetic resonance image data including intra- and intersite comparison. Locations and magnitude of geometric deformation is studied...2008-01-01
74 Gerig, GuidoWhite matter microstructure and atypical visual orienting in 7 month-olds at risk for autismObjective: The authors sought to determine whether specific patterns of oculo-motor functioning and visual orientingcharacterize 7-month-old infants who later meet criteria for an autism spectrum disorder (ASD) and to identify the neural correlates of these behaviors. Method:Data were collected from...2013-01-01
75 Gerig, GuidoVoxel-wise group analysis of DTIDiffusion tensor MRI (DTI) is now a widely used modality to investigate the fiber tissues in vivo, especially the white matter in brain. An automatic pipeline is described in this paper to conduct a localized voxel-wise multiple-subject group comparison study of DTI. The pipeline consists of 3 steps...2009-01-01
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